ClinVar Miner

Submissions for variant NM_002335.4(LRP5):c.3857G>A (p.Cys1286Tyr)

dbSNP: rs1326459816
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Mendelics RCV000988588 SCV001138365 likely pathogenic Osteoporosis with pseudoglioma 2019-05-28 criteria provided, single submitter clinical testing
Invitae RCV002549716 SCV003324051 uncertain significance not provided 2022-07-27 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is expected to disrupt LRP5 protein function. ClinVar contains an entry for this variant (Variation ID: 802696). This variant has not been reported in the literature in individuals affected with LRP5-related conditions. This variant is not present in population databases (gnomAD no frequency). This sequence change replaces cysteine, which is neutral and slightly polar, with tyrosine, which is neutral and polar, at codon 1286 of the LRP5 protein (p.Cys1286Tyr).

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