ClinVar Miner

Submissions for variant NM_002449.5(MSX2):c.505A>G (p.Ile169Val)

dbSNP: rs2113498787
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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001874279 SCV002124866 uncertain significance Cranium bifidum occultum 2022-02-05 criteria provided, single submitter clinical testing This variant has not been reported in the literature in individuals affected with MSX2-related conditions. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Deleterious"; PolyPhen-2: "Probably Damaging"; Align-GVGD: "Class C0"). This missense change has been observed in at least one individual who was not affected with MSX2-related conditions (Invitae). This variant is not present in population databases (gnomAD no frequency). This sequence change replaces isoleucine, which is neutral and non-polar, with valine, which is neutral and non-polar, at codon 169 of the MSX2 protein (p.Ile169Val).

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