ClinVar Miner

Submissions for variant NM_002454.3(MTRR):c.739C>T (p.Pro247Ser)

gnomAD frequency: 0.00190  dbSNP: rs114053717
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Total submissions: 5
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Illumina Laboratory Services, Illumina RCV000358385 SCV000458436 likely benign Disorders of Intracellular Cobalamin Metabolism 2018-01-12 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score and internal cut-off values, a variant classified as likely benign is not then subjected to further curation. The score for this variant resulted in a classification of likely benign for this disease.
Invitae RCV000872621 SCV001014468 likely benign Methylcobalamin deficiency type cblE 2024-01-27 criteria provided, single submitter clinical testing
Fulgent Genetics, Fulgent Genetics RCV002488786 SCV002798453 likely benign Methylcobalamin deficiency type cblE; Neural tube defects, folate-sensitive 2021-09-01 criteria provided, single submitter clinical testing
PreventionGenetics, part of Exact Sciences RCV003957826 SCV004767672 likely benign MTRR-related disorder 2020-10-14 criteria provided, single submitter clinical testing This variant is classified as likely benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications).
Natera, Inc. RCV000872621 SCV002077199 benign Methylcobalamin deficiency type cblE 2020-01-19 no assertion criteria provided clinical testing

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