ClinVar Miner

Submissions for variant NM_002471.4(MYH6):c.2039G>A (p.Arg680Gln)

gnomAD frequency: 0.00003  dbSNP: rs551746815
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV000704826 SCV000833795 uncertain significance Hypertrophic cardiomyopathy 14 2024-10-03 criteria provided, single submitter clinical testing This sequence change replaces arginine, which is basic and polar, with glutamine, which is neutral and polar, at codon 680 of the MYH6 protein (p.Arg680Gln). This variant is present in population databases (rs551746815, gnomAD 0.008%). This variant has not been reported in the literature in individuals affected with MYH6-related conditions. ClinVar contains an entry for this variant (Variation ID: 581101). Invitae Evidence Modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) has been performed for this missense variant. However, the output from this modeling did not meet the statistical confidence thresholds required to predict the impact of this variant on MYH6 protein function. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Ambry Genetics RCV002422596 SCV002723030 uncertain significance Cardiovascular phenotype 2022-07-06 criteria provided, single submitter clinical testing The p.R680Q variant (also known as c.2039G>A), located in coding exon 15 of the MYH6 gene, results from a G to A substitution at nucleotide position 2039. The arginine at codon 680 is replaced by glutamine, an amino acid with highly similar properties. This amino acid position is conserved. In addition, this alteration is predicted to be tolerated by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.

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