ClinVar Miner

Submissions for variant NM_002471.4(MYH6):c.5644C>T (p.Arg1882Cys)

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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV003005096 SCV003300050 uncertain significance Hypertrophic cardiomyopathy 14 2024-02-15 criteria provided, single submitter clinical testing This sequence change replaces arginine, which is basic and polar, with cysteine, which is neutral and slightly polar, at codon 1882 of the MYH6 protein (p.Arg1882Cys). This variant is present in population databases (rs779397173, gnomAD 0.006%). This variant has not been reported in the literature in individuals affected with MYH6-related conditions. ClinVar contains an entry for this variant (Variation ID: 2085502). Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is expected to disrupt MYH6 protein function with a positive predictive value of 80%. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Ambry Genetics RCV003308410 SCV004007652 uncertain significance Cardiovascular phenotype 2023-05-30 criteria provided, single submitter clinical testing The p.R1882C variant (also known as c.5644C>T), located in coding exon 35 of the MYH6 gene, results from a C to T substitution at nucleotide position 5644. The arginine at codon 1882 is replaced by cysteine, an amino acid with highly dissimilar properties. This amino acid position is conserved. In addition, this alteration is predicted to be deleterious by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.

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