ClinVar Miner

Submissions for variant NM_002485.5(NBN):c.250C>T (p.Gln84Ter)

dbSNP: rs1586108714
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV000804317 SCV000944220 pathogenic Microcephaly, normal intelligence and immunodeficiency 2021-12-07 criteria provided, single submitter clinical testing For these reasons, this variant has been classified as Pathogenic. ClinVar contains an entry for this variant (Variation ID: 649395). This variant has not been reported in the literature in individuals affected with NBN-related conditions. This variant is not present in population databases (gnomAD no frequency). This sequence change creates a premature translational stop signal (p.Gln84*) in the NBN gene. It is expected to result in an absent or disrupted protein product. Loss-of-function variants in NBN are known to be pathogenic (PMID: 9590180, 16415040).
Ambry Genetics RCV004028167 SCV005019040 pathogenic Hereditary cancer-predisposing syndrome 2024-02-16 criteria provided, single submitter clinical testing The p.Q84* pathogenic mutation (also known as c.250C>T), located in coding exon 3 of the NBN gene, results from a C to T substitution at nucleotide position 250. This changes the amino acid from a glutamine to a stop codon within coding exon 3. This alteration is expected to result in loss of function by premature protein truncation or nonsense-mediated mRNA decay. This variant is considered to be rare based on population cohorts in the Genome Aggregation Database (gnomAD). As such, this alteration is interpreted as a disease-causing mutation.
Laboratory for Genotyping Development, RIKEN RCV003166237 SCV002758179 pathogenic Gastric cancer 2021-07-01 no assertion criteria provided research

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