Total submissions: 3
| Submitter | RCV | SCV | Clinical significance | Condition | Last evaluated | Review status | Method | Comment |
|---|---|---|---|---|---|---|---|---|
| Labcorp Genetics |
RCV000806918 | SCV000946940 | uncertain significance | not provided | 2024-12-29 | criteria provided, single submitter | clinical testing | This sequence change replaces alanine, which is neutral and non-polar, with aspartic acid, which is acidic and polar, at codon 123 of the NTHL1 protein (p.Ala123Asp). This variant is not present in population databases (gnomAD no frequency). This variant has not been reported in the literature in individuals affected with NTHL1-related conditions. ClinVar contains an entry for this variant (Variation ID: 651534). An algorithm developed to predict the effect of missense changes on protein structure and function (PolyPhen-2) suggests that this variant is likely to be tolerated. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. |
| Ambry Genetics | RCV002352388 | SCV002624395 | uncertain significance | Hereditary cancer-predisposing syndrome | 2024-09-04 | criteria provided, single submitter | clinical testing | The p.A123D variant (also known as c.368C>A), located in coding exon 2 of the NTHL1 gene, results from a C to A substitution at nucleotide position 368. The alanine at codon 123 is replaced by aspartic acid, an amino acid with dissimilar properties. This amino acid position is well conserved in available vertebrate species. In addition, this alteration is predicted to be tolerated by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear. |
| Baylor Genetics | RCV004569638 | SCV005053737 | uncertain significance | Familial adenomatous polyposis 3 | 2024-01-24 | criteria provided, single submitter | clinical testing |