ClinVar Miner

Submissions for variant NM_002529.4(NTRK1):c.1004C>A (p.Pro335Gln)

dbSNP: rs758490619
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001313589 SCV001504090 uncertain significance Hereditary insensitivity to pain with anhidrosis 2021-08-27 criteria provided, single submitter clinical testing This sequence change replaces proline with glutamine at codon 335 of the NTRK1 protein (p.Pro335Gln). The proline residue is weakly conserved and there is a moderate physicochemical difference between proline and glutamine. This variant is not present in population databases (ExAC no frequency). This variant has not been reported in the literature in individuals affected with NTRK1-related conditions. Algorithms developed to predict the effect of missense changes on protein structure and function output the following: SIFT: "Tolerated"; PolyPhen-2: "Benign"; Align-GVGD: "Class C0". The glutamine amino acid residue is found in multiple mammalian species, which suggests that this missense change does not adversely affect protein function. Algorithms developed to predict the effect of sequence changes on RNA splicing suggest that this variant may create or strengthen a splice site. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Natera, Inc. RCV001313589 SCV002086547 uncertain significance Hereditary insensitivity to pain with anhidrosis 2021-04-20 no assertion criteria provided clinical testing

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