ClinVar Miner

Submissions for variant NM_002734.5(PRKAR1A):c.37C>T (p.Arg13Cys)

gnomAD frequency: 0.00001  dbSNP: rs1177674637
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001225158 SCV001397397 uncertain significance Carney complex, type 1 2023-11-06 criteria provided, single submitter clinical testing This sequence change replaces arginine, which is basic and polar, with cysteine, which is neutral and slightly polar, at codon 13 of the PRKAR1A protein (p.Arg13Cys). This variant is not present in population databases (gnomAD no frequency). This variant has not been reported in the literature in individuals affected with PRKAR1A-related conditions. ClinVar contains an entry for this variant (Variation ID: 952943). An algorithm developed to predict the effect of missense changes on protein structure and function (PolyPhen-2) suggests that this variant is likely to be disruptive. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Ambry Genetics RCV002356956 SCV002620147 uncertain significance Hereditary cancer-predisposing syndrome 2023-05-24 criteria provided, single submitter clinical testing The p.R13C variant (also known as c.37C>T), located in coding exon 1 of the PRKAR1A gene, results from a C to T substitution at nucleotide position 37. The arginine at codon 13 is replaced by cysteine, an amino acid with highly dissimilar properties. This amino acid position is highly conserved in available vertebrate species. In addition, the in silico prediction for this alteration is inconclusive. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.
Baylor Genetics RCV003462768 SCV004206519 uncertain significance Acrodysostosis 1 with or without hormone resistance 2023-05-17 criteria provided, single submitter clinical testing

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