ClinVar Miner

Submissions for variant NM_002834.5(PTPN11):c.616T>C (p.Leu206=)

gnomAD frequency: 0.00006  dbSNP: rs78376169
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Total submissions: 7
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001455888 SCV001659657 likely benign RASopathy 2021-10-11 criteria provided, single submitter clinical testing
GeneDx RCV000867523 SCV001795155 likely benign not provided 2020-06-10 criteria provided, single submitter clinical testing
Ambry Genetics RCV002352544 SCV002654539 likely benign Cardiovascular phenotype 2019-08-14 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
Fulgent Genetics, Fulgent Genetics RCV002501269 SCV002810828 likely benign Noonan syndrome 1; Juvenile myelomonocytic leukemia; Metachondromatosis; LEOPARD syndrome 1 2021-12-22 criteria provided, single submitter clinical testing
PreventionGenetics, part of Exact Sciences RCV004538257 SCV004748147 likely benign PTPN11-related disorder 2019-06-07 criteria provided, single submitter clinical testing This variant is classified as likely benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications).
Genome Diagnostics Laboratory, University Medical Center Utrecht RCV000867523 SCV001929615 likely benign not provided no assertion criteria provided clinical testing
Joint Genome Diagnostic Labs from Nijmegen and Maastricht, Radboudumc and MUMC+ RCV000867523 SCV001956327 likely benign not provided no assertion criteria provided clinical testing

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