ClinVar Miner

Submissions for variant NM_002857.4(PEX19):c.667A>G (p.Ser223Gly)

gnomAD frequency: 0.00001  dbSNP: rs778154365
Minimum review status: Collection method:
Minimum conflict level:
ClinVar version:
Total submissions: 2
Download table as spreadsheet
Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001066713 SCV001231730 uncertain significance Peroxisome biogenesis disorder 12A (Zellweger) 2022-07-12 criteria provided, single submitter clinical testing This sequence change replaces serine, which is neutral and polar, with glycine, which is neutral and non-polar, at codon 223 of the PEX19 protein (p.Ser223Gly). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of missense changes on protein structure and function (SIFT, PolyPhen-2, Align-GVGD) all suggest that this variant is likely to be tolerated. ClinVar contains an entry for this variant (Variation ID: 860421). This variant has not been reported in the literature in individuals affected with PEX19-related conditions. This variant is present in population databases (rs778154365, gnomAD 0.02%).
Ambry Genetics RCV003160550 SCV003882876 uncertain significance Inborn genetic diseases 2023-02-07 criteria provided, single submitter clinical testing The c.667A>G (p.S223G) alteration is located in exon 6 (coding exon 6) of the PEX19 gene. This alteration results from a A to G substitution at nucleotide position 667, causing the serine (S) at amino acid position 223 to be replaced by a glycine (G). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

The information on this website is not intended for direct diagnostic use or medical decision-making without review by a genetics professional. Individuals should not change their health behavior solely on the basis of information contained on this website. Neither the University of Utah nor the National Institutes of Health independently verfies the submitted information. If you have questions about the information contained on this website, please see a health care professional.