ClinVar Miner

Submissions for variant NM_003001.5(SDHC):c.178A>G (p.Ser60Gly)

dbSNP: rs1571851728
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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV000796480 SCV000935995 uncertain significance Gastrointestinal stromal tumor; Paragangliomas 3 2019-06-03 criteria provided, single submitter clinical testing This sequence change replaces serine with glycine at codon 60 of the SDHC protein (p.Ser60Gly). The serine residue is weakly conserved and there is a small physicochemical difference between serine and glycine. This variant is not present in population databases (ExAC no frequency). This variant has not been reported in the literature in individuals with SDHC-related disease. Algorithms developed to predict the effect of missense changes on protein structure and function output the following: SIFT: "Deleterious"; PolyPhen-2: "Benign"; Align-GVGD: "Class C0". The glycine amino acid residue is found in multiple mammalian species, suggesting that this missense change does not adversely affect protein function. These predictions have not been confirmed by published functional studies and their clinical significance is uncertain. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.

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