ClinVar Miner

Submissions for variant NM_003072.5(SMARCA4):c.3823G>C (p.Ala1275Pro)

dbSNP: rs1600393728
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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001226676 SCV001398997 uncertain significance Rhabdoid tumor predisposition syndrome 2 2019-07-12 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of missense changes on protein structure and function (SIFT, PolyPhen-2, Align-GVGD) all suggest that this variant is likely to be tolerated, but these predictions have not been confirmed by published functional studies and their clinical significance is uncertain. This variant has not been reported in the literature in individuals with SMARCA4-related conditions. This variant is not present in population databases (ExAC no frequency). This sequence change replaces alanine with proline at codon 1275 of the SMARCA4 protein (p.Ala1275Pro). The alanine residue is moderately conserved and there is a small physicochemical difference between alanine and proline.

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