ClinVar Miner

Submissions for variant NM_003126.4(SPTA1):c.6221C>T (p.Ser2074Phe)

Minimum review status: Collection method:
Minimum conflict level:
ClinVar version:
Total submissions: 1
Download table as spreadsheet
Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Neuberg Centre For Genomic Medicine, NCGM RCV003337728 SCV004047955 uncertain significance Hereditary spherocytosis type 3 criteria provided, single submitter clinical testing The missense c.6221C>T (p.Ser2074Phe) variant in SPTA1 gene has not been reported previously as a pathogenic variant nor as a benign variant, to our knowledge. The variant is novel (not in any individuals) in gnomAD Exomes and 1000 Genomes. The amino acid Ser at position 2074 is changed to a Phe changing protein sequence and it might alter its composition and physico-chemical properties. The amino acid change p.Ser2074Phe in SPTA1 is predicted as conserved by GERP++ and PhyloP across 100 vertebrates. For these reasons, this variant has been classified as Uncertain Significance. In the absence of second reportable variant the molecular diagnosis is not confirmed.

The information on this website is not intended for direct diagnostic use or medical decision-making without review by a genetics professional. Individuals should not change their health behavior solely on the basis of information contained on this website. Neither the University of Utah nor the National Institutes of Health independently verfies the submitted information. If you have questions about the information contained on this website, please see a health care professional.