ClinVar Miner

Submissions for variant NM_003238.6(TGFB2):c.357G>A (p.Pro119=)

gnomAD frequency: 0.00054  dbSNP: rs138514914
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Total submissions: 9
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
GeneDx RCV000198675 SCV000250834 benign not specified 2015-03-02 criteria provided, single submitter clinical testing This variant is considered likely benign or benign based on one or more of the following criteria: it is a conservative change, it occurs at a poorly conserved position in the protein, it is predicted to be benign by multiple in silico algorithms, and/or has population frequency not consistent with disease.
Ambry Genetics RCV002310794 SCV000319482 likely benign Familial thoracic aortic aneurysm and aortic dissection 2015-03-16 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
Illumina Laboratory Services, Illumina RCV000354527 SCV000354239 benign Loeys-Dietz syndrome 4 2018-01-13 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score and internal cut-off values, a variant classified as benign is not then subjected to further curation. The score for this variant resulted in a classification of benign for this disease.
Labcorp Genetics (formerly Invitae), Labcorp RCV000354527 SCV000755466 benign Loeys-Dietz syndrome 4 2024-01-25 criteria provided, single submitter clinical testing
Center for Human Genetics, Inc, Center for Human Genetics, Inc RCV000680609 SCV000808039 likely benign Connective tissue disorder 2018-06-01 criteria provided, single submitter clinical testing
Women's Health and Genetics/Laboratory Corporation of America, LabCorp RCV000198675 SCV001821406 likely benign not specified 2021-08-28 criteria provided, single submitter clinical testing
Genome Diagnostics Laboratory, The Hospital for Sick Children RCV002277543 SCV002566118 likely benign Ehlers-Danlos syndrome 2021-12-08 criteria provided, single submitter clinical testing
Fulgent Genetics, Fulgent Genetics RCV000354527 SCV002807405 likely benign Loeys-Dietz syndrome 4 2021-07-27 criteria provided, single submitter clinical testing
ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories RCV000354527 SCV004564016 benign Loeys-Dietz syndrome 4 2023-05-15 criteria provided, single submitter clinical testing

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