ClinVar Miner

Submissions for variant NM_003477.3(PDHX):c.641+4T>C

gnomAD frequency: 0.02645  dbSNP: rs2767035
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Total submissions: 5
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Illumina Laboratory Services, Illumina RCV000375898 SCV000371623 benign Pyruvate dehydrogenase E3-binding protein deficiency 2018-01-12 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score and internal cut-off values, a variant classified as benign is not then subjected to further curation. The score for this variant resulted in a classification of benign for this disease.
Labcorp Genetics (formerly Invitae), Labcorp RCV000676197 SCV001727485 benign not provided 2024-02-01 criteria provided, single submitter clinical testing
GeneDx RCV000676197 SCV001866580 benign not provided 2015-03-03 criteria provided, single submitter clinical testing
Breakthrough Genomics, Breakthrough Genomics RCV000676197 SCV005316083 benign not provided criteria provided, single submitter not provided
Mayo Clinic Laboratories, Mayo Clinic RCV000676197 SCV000801950 benign not provided 2017-09-06 no assertion criteria provided clinical testing

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