ClinVar Miner

Submissions for variant NM_003491.4(NAA10):c.10C>G (p.Arg4Gly)

dbSNP: rs2148537151
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001884103 SCV002153418 likely pathogenic not provided 2022-04-11 criteria provided, single submitter clinical testing In summary, the currently available evidence indicates that the variant is pathogenic, but additional data are needed to prove that conclusively. Therefore, this variant has been classified as Likely Pathogenic. This sequence change replaces arginine, which is basic and polar, with glycine, which is neutral and non-polar, at codon 4 of the NAA10 protein (p.Arg4Gly). This variant is not present in population databases (gnomAD no frequency). This missense change has been observed in individual(s) with clinical features of Ogden syndrome (Invitae). In at least one individual the variant was observed to be de novo. Algorithms developed to predict the effect of missense changes on protein structure and function (SIFT, PolyPhen-2, Align-GVGD) all suggest that this variant is likely to be disruptive.
Revvity Omics, Revvity RCV001884103 SCV003811012 uncertain significance not provided 2020-08-21 criteria provided, single submitter clinical testing

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