ClinVar Miner

Submissions for variant NM_003640.5(ELP1):c.948G>A (p.Pro316=)

gnomAD frequency: 0.00043  dbSNP: rs148917889
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Total submissions: 7
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000529925 SCV000626033 likely benign not provided 2024-01-31 criteria provided, single submitter clinical testing
GeneDx RCV000529925 SCV000728570 likely benign not provided 2020-07-30 criteria provided, single submitter clinical testing
Illumina Laboratory Services, Illumina RCV001168466 SCV001331058 uncertain significance Familial dysautonomia 2018-01-13 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score, this variant could not be ruled out of causing disease and therefore its association with disease required further investigation. A literature search was performed for the gene, cDNA change, and amino acid change (if applicable). No publications were found based on this search. This variant was therefore classified as a variant of unknown significance for this disease.
Genome-Nilou Lab RCV001168466 SCV001653374 likely benign Familial dysautonomia 2021-05-18 criteria provided, single submitter clinical testing
Ambry Genetics RCV002461287 SCV002756051 likely benign Inborn genetic diseases 2022-08-01 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
CeGaT Center for Human Genetics Tuebingen RCV000529925 SCV004158543 likely benign not provided 2023-06-01 criteria provided, single submitter clinical testing ELP1: BP4, BP7
Natera, Inc. RCV001168466 SCV001452213 likely benign Familial dysautonomia 2019-12-17 no assertion criteria provided clinical testing

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