ClinVar Miner

Submissions for variant NM_003793.4(CTSF):c.1401T>C (p.Arg467=)

gnomAD frequency: 0.62182  dbSNP: rs572846
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Total submissions: 11
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
PreventionGenetics, part of Exact Sciences RCV000249206 SCV000309831 benign not specified criteria provided, single submitter clinical testing
Eurofins Ntd Llc (ga) RCV000249206 SCV000338634 benign not specified 2015-12-23 criteria provided, single submitter clinical testing
Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center RCV000625316 SCV000744902 benign Neuronal ceroid lipofuscinosis 13 2015-09-21 criteria provided, single submitter clinical testing
Athena Diagnostics RCV000675400 SCV000841685 benign not provided 2017-04-20 criteria provided, single submitter clinical testing
Ambry Genetics RCV002311381 SCV000845987 benign Inborn genetic diseases 2016-01-08 criteria provided, single submitter clinical testing This alteration is classified as benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
GeneDx RCV000675400 SCV000985857 benign not provided 2018-06-13 criteria provided, single submitter clinical testing This variant is considered likely benign or benign based on one or more of the following criteria: it is a conservative change, it occurs at a poorly conserved position in the protein, it is predicted to be benign by multiple in silico algorithms, and/or has population frequency not consistent with disease.
Labcorp Genetics (formerly Invitae), Labcorp RCV000625316 SCV001727473 benign Neuronal ceroid lipofuscinosis 13 2025-02-03 criteria provided, single submitter clinical testing
Genome-Nilou Lab RCV000625316 SCV001876392 benign Neuronal ceroid lipofuscinosis 13 2021-07-30 criteria provided, single submitter clinical testing
Breakthrough Genomics, Breakthrough Genomics RCV000675400 SCV005318625 benign not provided criteria provided, single submitter not provided
Genome Diagnostics Laboratory, Amsterdam University Medical Center RCV000625316 SCV000745743 benign Neuronal ceroid lipofuscinosis 13 2016-04-22 no assertion criteria provided clinical testing
Mayo Clinic Laboratories, Mayo Clinic RCV000675400 SCV000801073 benign not provided 2015-10-22 no assertion criteria provided clinical testing

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