ClinVar Miner

Submissions for variant NM_003900.5(SQSTM1):c.*279C>G

gnomAD frequency: 0.01439  dbSNP: rs11548631
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Illumina Laboratory Services, Illumina RCV000290195 SCV000456929 benign Paget disease of bone 3 2018-01-12 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score and internal cut-off values, a variant classified as benign is not then subjected to further curation. The score for this variant resulted in a classification of benign for this disease.
GeneDx RCV001584073 SCV001820672 likely benign not provided 2019-06-27 criteria provided, single submitter clinical testing
Breakthrough Genomics, Breakthrough Genomics RCV001584073 SCV005222661 likely benign not provided criteria provided, single submitter not provided

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