Total submissions: 7
Submitter | RCV | SCV | Clinical significance | Condition | Last evaluated | Review status | Method | Comment |
---|---|---|---|---|---|---|---|---|
Illumina Laboratory Services, |
RCV000460482 | SCV000377013 | likely benign | Multiple endocrine neoplasia type 4 | 2017-04-27 | criteria provided, single submitter | clinical testing | This variant was observed as part of a predisposition screen in an ostensibly healthy population. A literature search was performed for the gene, cDNA change, and amino acid change (where applicable). No publications were found based on this search. Allele frequency data from public databases allowed determination this variant is unlikely to cause disease. Therefore, this variant is classified as likely benign. |
Invitae | RCV000460482 | SCV000554683 | likely benign | Multiple endocrine neoplasia type 4 | 2024-02-01 | criteria provided, single submitter | clinical testing | |
Ambry Genetics | RCV001019555 | SCV001180929 | benign | Hereditary cancer-predisposing syndrome | 2022-04-28 | criteria provided, single submitter | clinical testing | This alteration is classified as benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity. |
Sema4, |
RCV001019555 | SCV002535483 | benign | Hereditary cancer-predisposing syndrome | 2022-03-16 | criteria provided, single submitter | curation | |
St. |
RCV000460482 | SCV002584732 | uncertain significance | Multiple endocrine neoplasia type 4 | 2022-07-12 | criteria provided, single submitter | clinical testing | The CDKN1B c.326T>A (p.Val109Asp) missense change has a maximum subpopulation frequency of 0.099% in gnomAD v2.1.1 (https://gnomad.broadinstitute.org/). The in silico tool REVEL predicts a benign effect on protein function, but to our knowledge this prediction has not been confirmed by functional studies. To our knowledge, this variant has not been reported in the literature in individuals with multiple endocrine neoplasia type 4. In summary, the evidence currently available is insufficient to determine the clinical significance of this variant. It has therefore been classified as of uncertain significance. |
Quest Diagnostics Nichols Institute San Juan Capistrano | RCV003477882 | SCV004220755 | likely benign | not provided | 2022-03-14 | criteria provided, single submitter | clinical testing | |
Prevention |
RCV003897706 | SCV004710354 | likely benign | CDKN1B-related disorder | 2022-04-26 | criteria provided, single submitter | clinical testing | This variant is classified as likely benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications). |