ClinVar Miner

Submissions for variant NM_004082.5(DCTN1):c.2060G>C (p.Ser687Thr)

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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Ambry Genetics RCV002421971 SCV002725126 uncertain significance Inborn genetic diseases 2020-02-24 criteria provided, single submitter clinical testing The p.S687T variant (also known as c.2060G>C), located in coding exon 18 of the DCTN1 gene, results from a G to C substitution at nucleotide position 2060. The serine at codon 687 is replaced by threonine, an amino acid with similar properties. This amino acid position is not well conserved in available vertebrate species. In addition, this alteration is predicted to be tolerated by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.
Invitae RCV003775082 SCV004585907 uncertain significance Amyotrophic lateral sclerosis type 1; Perry syndrome; Neuronopathy, distal hereditary motor, type 7B 2023-09-29 criteria provided, single submitter clinical testing This sequence change replaces serine, which is neutral and polar, with threonine, which is neutral and polar, at codon 687 of the DCTN1 protein (p.Ser687Thr). This variant is present in population databases (rs768416546, gnomAD 0.009%). This variant has not been reported in the literature in individuals affected with DCTN1-related conditions. ClinVar contains an entry for this variant (Variation ID: 1785222). Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is not expected to disrupt DCTN1 protein function. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.

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