ClinVar Miner

Submissions for variant NM_004104.5(FASN):c.5095G>C (p.Val1699Leu)

dbSNP: rs763579516
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000793346 SCV000932694 uncertain significance Epileptic encephalopathy 2022-11-13 criteria provided, single submitter clinical testing This variant has not been reported in the literature in individuals affected with FASN-related conditions. Algorithms developed to predict the effect of sequence changes on RNA splicing suggest that this variant may disrupt the consensus splice site. Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Deleterious"; PolyPhen-2: "Probably Damaging"; Align-GVGD: "Class C0"). ClinVar contains an entry for this variant (Variation ID: 640339). This variant is present in population databases (rs763579516, gnomAD 0.01%). This sequence change replaces valine, which is neutral and non-polar, with leucine, which is neutral and non-polar, at codon 1699 of the FASN protein (p.Val1699Leu). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Ambry Genetics RCV002536960 SCV003725180 uncertain significance Inborn genetic diseases 2022-04-25 criteria provided, single submitter clinical testing The c.5095G>C (p.V1699L) alteration is located in exon 29 (coding exon 28) of the FASN gene. This alteration results from a G to C substitution at nucleotide position 5095, causing the valine (V) at amino acid position 1699 to be replaced by a leucine (L). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

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