ClinVar Miner

Submissions for variant NM_004287.5(GOSR2):c.579G>A (p.Met193Ile)

gnomAD frequency: 0.00002  dbSNP: rs768377570
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001045568 SCV001209429 uncertain significance Progressive myoclonic epilepsy 2022-08-20 criteria provided, single submitter clinical testing This sequence change replaces methionine, which is neutral and non-polar, with isoleucine, which is neutral and non-polar, at codon 193 of the GOSR2 protein (p.Met193Ile). This variant is present in population databases (rs768377570, gnomAD 0.003%). This variant has not been reported in the literature in individuals affected with GOSR2-related conditions. ClinVar contains an entry for this variant (Variation ID: 843038). Algorithms developed to predict the effect of missense changes on protein structure and function (SIFT, PolyPhen-2, Align-GVGD) all suggest that this variant is likely to be tolerated. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Ambry Genetics RCV002553125 SCV003613085 uncertain significance Inborn genetic diseases 2022-04-08 criteria provided, single submitter clinical testing The c.579G>A (p.M193I) alteration is located in exon 6 (coding exon 6) of the GOSR2 gene. This alteration results from a G to A substitution at nucleotide position 579, causing the methionine (M) at amino acid position 193 to be replaced by an isoleucine (I). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

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