ClinVar Miner

Submissions for variant NM_004304.5(ALK):c.3403G>T (p.Val1135Leu)

dbSNP: rs2148169270
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001864853 SCV002121036 uncertain significance Neuroblastoma, susceptibility to, 3 2021-06-08 criteria provided, single submitter clinical testing This sequence change replaces valine with leucine at codon 1135 of the ALK protein (p.Val1135Leu). The valine residue is highly conserved and there is a small physicochemical difference between valine and leucine. This variant is not present in population databases (ExAC no frequency). This variant has not been reported in the literature in individuals with ALK-related conditions. Algorithms developed to predict the effect of missense changes on protein structure and function (SIFT, PolyPhen-2, Align-GVGD) all suggest that this variant is likely to be disruptive, but these predictions have not been confirmed by published functional studies and their clinical significance is uncertain. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Ambry Genetics RCV004039711 SCV005021871 uncertain significance Hereditary cancer-predisposing syndrome 2023-12-01 criteria provided, single submitter clinical testing The p.V1135L variant (also known as c.3403G>T), located in coding exon 21 of the ALK gene, results from a G to T substitution at nucleotide position 3403. The valine at codon 1135 is replaced by leucine, an amino acid with highly similar properties. This amino acid position is conserved. In addition, the in silico prediction for this alteration is inconclusive. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.

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