ClinVar Miner

Submissions for variant NM_004360.5(CDH1):c.699C>T (p.His233=)

gnomAD frequency: 0.00005  dbSNP: rs115494727
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Total submissions: 10
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
GeneDx RCV000212354 SCV000167591 benign not specified 2013-12-05 criteria provided, single submitter clinical testing This variant is considered likely benign or benign based on one or more of the following criteria: it is a conservative change, it occurs at a poorly conserved position in the protein, it is predicted to be benign by multiple in silico algorithms, and/or has population frequency not consistent with disease.
Ambry Genetics RCV000124177 SCV000213223 likely benign Hereditary cancer-predisposing syndrome 2014-09-05 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
Invitae RCV001083286 SCV000253427 likely benign Hereditary diffuse gastric adenocarcinoma 2024-01-27 criteria provided, single submitter clinical testing
Color Diagnostics, LLC DBA Color Health RCV000124177 SCV000684479 likely benign Hereditary cancer-predisposing syndrome 2015-11-13 criteria provided, single submitter clinical testing
Quest Diagnostics Nichols Institute San Juan Capistrano RCV000759016 SCV000888038 benign not provided 2018-06-21 criteria provided, single submitter clinical testing
Women's Health and Genetics/Laboratory Corporation of America, LabCorp RCV000212354 SCV001363230 benign not specified 2019-09-11 criteria provided, single submitter clinical testing
Sema4, Sema4 RCV000124177 SCV002529205 likely benign Hereditary cancer-predisposing syndrome 2021-05-28 criteria provided, single submitter curation
Center for Genomic Medicine, Rigshospitalet, Copenhagen University Hospital RCV000212354 SCV002551758 likely benign not specified 2023-08-15 criteria provided, single submitter clinical testing
European Reference Network on Genetic Tumour Risk Syndromes (ERN-GENTURIS), i3s - Instituto de Investigação e Inovação em Saúde, University of Porto RCV001083286 SCV003926681 uncertain significance Hereditary diffuse gastric adenocarcinoma 2022-08-01 criteria provided, single submitter clinical testing BP7 (PMID: 30311375)
PreventionGenetics, part of Exact Sciences RCV003894977 SCV004709497 likely benign CDH1-related condition 2020-12-28 criteria provided, single submitter clinical testing This variant is classified as likely benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications).

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