ClinVar Miner

Submissions for variant NM_004360.5(CDH1):c.827T>C (p.Leu276Pro)

dbSNP: rs1960786758
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001219823 SCV001391781 uncertain significance Hereditary diffuse gastric adenocarcinoma 2021-02-24 criteria provided, single submitter clinical testing This variant is not present in population databases (ExAC no frequency). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Tolerated"; PolyPhen-2: "Possibly Damaging"; Align-GVGD: "Class C0"). This variant has not been reported in the literature in individuals with CDH1-related conditions. This sequence change replaces leucine with proline at codon 276 of the CDH1 protein (p.Leu276Pro). The leucine residue is weakly conserved and there is a moderate physicochemical difference between leucine and proline.
Ambry Genetics RCV003163693 SCV003867725 uncertain significance Hereditary cancer-predisposing syndrome 2022-11-03 criteria provided, single submitter clinical testing The p.L276P variant (also known as c.827T>C), located in coding exon 6 of the CDH1 gene, results from a T to C substitution at nucleotide position 827. The leucine at codon 276 is replaced by proline, an amino acid with similar properties. This amino acid position is conserved. In addition, this alteration is predicted to be tolerated by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.

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