ClinVar Miner

Submissions for variant NM_004369.4(COL6A3):c.8962A>G (p.Met2988Val)

gnomAD frequency: 0.07295  dbSNP: rs11690358
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Total submissions: 10
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Eurofins Ntd Llc (ga) RCV000081018 SCV000112925 benign not specified 2012-08-07 criteria provided, single submitter clinical testing
PreventionGenetics, part of Exact Sciences RCV000081018 SCV000310244 benign not specified criteria provided, single submitter clinical testing
Illumina Laboratory Services, Illumina RCV000375437 SCV000428704 benign Collagen 6-related myopathy 2018-01-13 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score and internal cut-off values, a variant classified as benign is not then subjected to further curation. The score for this variant resulted in a classification of benign for this disease.
GeneDx RCV000081018 SCV000519387 benign not specified 2016-02-02 criteria provided, single submitter clinical testing This variant is considered likely benign or benign based on one or more of the following criteria: it is a conservative change, it occurs at a poorly conserved position in the protein, it is predicted to be benign by multiple in silico algorithms, and/or has population frequency not consistent with disease.
Athena Diagnostics RCV000710917 SCV000841227 benign not provided 2017-09-14 criteria provided, single submitter clinical testing
Labcorp Genetics (formerly Invitae), Labcorp RCV001517164 SCV001725606 benign Bethlem myopathy 1A 2025-02-03 criteria provided, single submitter clinical testing
Breakthrough Genomics, Breakthrough Genomics RCV000710917 SCV005246157 benign not provided criteria provided, single submitter not provided
Genetic Services Laboratory, University of Chicago RCV000081018 SCV000150870 likely benign not specified no assertion criteria provided clinical testing Likely benign based on allele frequency in 1000 Genomes Project or ESP global frequency and its presence in a patient with a rare or unrelated disease phenotype. NOT Sanger confirmed.
Clinical Genetics, Academic Medical Center RCV000081018 SCV001925177 benign not specified no assertion criteria provided clinical testing
Joint Genome Diagnostic Labs from Nijmegen and Maastricht, Radboudumc and MUMC+ RCV000081018 SCV001959613 benign not specified no assertion criteria provided clinical testing

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