ClinVar Miner

Submissions for variant NM_004371.4(COPA):c.863G>A (p.Arg288His)

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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000702689 SCV000831552 uncertain significance Autoimmune interstitial lung, joint, and kidney disease 2018-03-06 criteria provided, single submitter clinical testing This sequence change replaces arginine with histidine at codon 288 of the COPA protein (p.Arg288His). The arginine residue is highly conserved and there is a small physicochemical difference between arginine and histidine. This variant is present in population databases (rs781647709, ExAC 0.01%). This variant has not been reported in the literature in individuals with COPA-related disease. Algorithms developed to predict the effect of missense changes on protein structure and function do not agree on the potential impact of this missense change (SIFT: "Deleterious"; PolyPhen-2: "Probably Damaging"; Align-GVGD: "Class C0"). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.

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