ClinVar Miner

Submissions for variant NM_004415.4(DSP):c.2673T>C (p.Tyr891=)

gnomAD frequency: 0.00703  dbSNP: rs146407262
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Total submissions: 18
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Laboratory for Molecular Medicine, Mass General Brigham Personalized Medicine RCV000038012 SCV000061678 benign not specified 2012-03-19 criteria provided, single submitter clinical testing p.Tyr891Tyr in Exon 19 of DSP: This variant is not expected to have clinical sig nificance because it does not alter an amino acid residue, is not located within the splice consensus sequence and has been identified in 2.3% (87/3738) of Afri can American chromosomes from a broad population by the NHLBI Exome Sequencing P roject (http://evs.gs.washington.edu/EVS; dbSNP rs146407262).
GeneDx RCV000038012 SCV000168260 benign not specified 2014-01-23 criteria provided, single submitter clinical testing This variant is considered likely benign or benign based on one or more of the following criteria: it is a conservative change, it occurs at a poorly conserved position in the protein, it is predicted to be benign by multiple in silico algorithms, and/or has population frequency not consistent with disease.
Labcorp Genetics (formerly Invitae), Labcorp RCV001086676 SCV000288531 benign Arrhythmogenic cardiomyopathy with wooly hair and keratoderma; Arrhythmogenic right ventricular dysplasia 8 2025-01-28 criteria provided, single submitter clinical testing
Illumina Laboratory Services, Illumina RCV000344374 SCV000464942 likely benign Lethal acantholytic epidermolysis bullosa 2016-06-14 criteria provided, single submitter clinical testing
Illumina Laboratory Services, Illumina RCV000405620 SCV000464943 likely benign Arrhythmogenic right ventricular cardiomyopathy 2016-06-14 criteria provided, single submitter clinical testing
Illumina Laboratory Services, Illumina RCV000284266 SCV000464944 likely benign Epidermolysis bullosa simplex due to plakophilin deficiency 2016-06-14 criteria provided, single submitter clinical testing
Illumina Laboratory Services, Illumina RCV000339335 SCV000464945 likely benign Woolly hair-skin fragility syndrome 2016-06-14 criteria provided, single submitter clinical testing
Women's Health and Genetics/Laboratory Corporation of America, LabCorp RCV000587575 SCV000698426 benign not provided 2016-09-19 criteria provided, single submitter clinical testing Variant summary: The DSP c.2673T>C (p.Tyr891Tyr) variant involves the alteration of a non-conserved nucleotide, resulting in a synonymous change. 5/5 splice prediction tools predict no significant impact on normal splicing. This variant was found in 257/121370 control chromosomes, predominantly observed in the African subpopulation at a frequency of 0.0239654 (249/10390). This frequency is about 959 times the estimated maximal expected allele frequency of a pathogenic DSP variant (0.000025), suggesting this is likely a benign polymorphism found primarily in the populations of African origin. In addition, multiple clinical diagnostic laboratories have classified this variant as benign. The variant of interest has not, to our knowledge, been reported in affected individuals via publications. Taken together, this variant is classified as Benign.
CHEO Genetics Diagnostic Laboratory, Children's Hospital of Eastern Ontario RCV000769223 SCV000900599 benign Cardiomyopathy 2017-03-07 criteria provided, single submitter clinical testing
Color Diagnostics, LLC DBA Color Health RCV000769223 SCV000904531 benign Cardiomyopathy 2018-03-16 criteria provided, single submitter clinical testing
ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories RCV000587575 SCV001471686 benign not provided 2021-05-22 criteria provided, single submitter clinical testing
All of Us Research Program, National Institutes of Health RCV003996337 SCV004821005 benign Arrhythmogenic cardiomyopathy with wooly hair and keratoderma 2024-02-05 criteria provided, single submitter clinical testing
Breakthrough Genomics, Breakthrough Genomics RCV000587575 SCV005222743 likely benign not provided criteria provided, single submitter not provided
Clinical Genetics, Academic Medical Center RCV000038012 SCV001925468 benign not specified no assertion criteria provided clinical testing
Genome Diagnostics Laboratory, University Medical Center Utrecht RCV000038012 SCV001929007 benign not specified no assertion criteria provided clinical testing
Joint Genome Diagnostic Labs from Nijmegen and Maastricht, Radboudumc and MUMC+ RCV000038012 SCV001956986 benign not specified no assertion criteria provided clinical testing
Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center RCV000038012 SCV001973552 benign not specified no assertion criteria provided clinical testing
Cohesion Phenomics RCV000769223 SCV003802967 benign Cardiomyopathy 2022-09-23 no assertion criteria provided clinical testing

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