ClinVar Miner

Submissions for variant NM_004453.4(ETFDH):c.245C>T (p.Ser82Phe)

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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Women's Health and Genetics/Laboratory Corporation of America, LabCorp RCV003388535 SCV004100224 uncertain significance not specified 2023-09-27 criteria provided, single submitter clinical testing Variant summary: ETFDH c.245C>T (p.Ser82Phe) results in a non-conservative amino acid change in the encoded protein sequence. Five of five in-silico tools predict a damaging effect of the variant on protein function. The variant was absent in 251430 control chromosomes. c.245C>T has been reported in the literature in a homozygous state in an individual affected with adolescent onset Glutaric Aciduria and in a compound heterozygous state in another individual with childhood onset Glutaric Aciduria (e.g. Behin_2016, Goodman_2002). These data indicate that the variant may be associated with disease. To our knowledge, no e(e.g. Behin_2016, Goodman_2002). These data indicate that the variant may be associated with disease. To our knowledge, no experimental evidence demonstrating an impact on protein function has been reported. The following publications have been ascertained in the context of this evaluation (PMID: 27038534, 12359134). No submitters have cited clinical-significance assessments for this variant to ClinVar after 2014. Based on the evidence outlined above, the variant was classified as VUS-possibly pathogenic.
PreventionGenetics, part of Exact Sciences RCV003420682 SCV004116156 uncertain significance ETFDH-related disorder 2023-08-03 criteria provided, single submitter clinical testing The ETFDH c.245C>T variant is predicted to result in the amino acid substitution p.Ser82Phe. This variant has been reported in the homozygous state or along with a second variant in two individuals with multiple acyl-CoA dehydrogenase deficiency (Goodman et al 2002. PubMed ID: 12359134; Béhin A et al 2016. PubMed ID: 27038534). This variant is reported in 0.0065% of alleles in individuals of European (Non-Finnish) descent in gnomAD (http://gnomad.broadinstitute.org/variant/4-159603416-C-T). Although we suspect that this variant may be pathogenic, at this time, the clinical significance of this variant is uncertain due to the absence of conclusive functional and genetic evidence.
Baylor Genetics RCV003475572 SCV004194803 likely pathogenic Multiple acyl-CoA dehydrogenase deficiency 2024-01-15 criteria provided, single submitter clinical testing

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