ClinVar Miner

Submissions for variant NM_004525.3(LRP2):c.9477G>A (p.Met3159Ile)

gnomAD frequency: 0.00152  dbSNP: rs144322413
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Total submissions: 6
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Eurofins Ntd Llc (ga) RCV000732277 SCV000860209 uncertain significance not provided 2018-03-05 criteria provided, single submitter clinical testing
Labcorp Genetics (formerly Invitae), Labcorp RCV000732277 SCV001047980 likely benign not provided 2025-01-20 criteria provided, single submitter clinical testing
Genome-Nilou Lab RCV001807340 SCV002054740 uncertain significance Donnai-Barrow syndrome 2021-07-15 criteria provided, single submitter clinical testing
Ambry Genetics RCV002535262 SCV003683132 likely benign Inborn genetic diseases 2021-08-09 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
GeneDx RCV000732277 SCV003845606 uncertain significance not provided 2023-03-26 criteria provided, single submitter clinical testing In silico analysis supports that this missense variant does not alter protein structure/function; Has not been previously published as pathogenic or benign to our knowledge
PreventionGenetics, part of Exact Sciences RCV003965535 SCV004784079 likely benign LRP2-related disorder 2022-08-02 no assertion criteria provided clinical testing This variant is classified as likely benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications).

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