ClinVar Miner

Submissions for variant NM_004629.2(FANCG):c.175+1G>A

gnomAD frequency: 0.00001  dbSNP: rs927868500
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001863074 SCV002272562 likely pathogenic Fanconi anemia 2021-09-20 criteria provided, single submitter clinical testing In summary, the currently available evidence indicates that the variant is pathogenic, but additional data are needed to prove that conclusively. Therefore, this variant has been classified as Likely Pathogenic. Algorithms developed to predict the effect of sequence changes on RNA splicing suggest that this variant may disrupt the consensus splice site. ClinVar contains an entry for this variant (Variation ID: 929674). Disruption of this splice site has been observed in individual(s) with FANCG-related conditions (PMID: 11093276). This variant is not present in population databases (ExAC no frequency). This sequence change affects a donor splice site in intron 2 of the FANCG gene. It is expected to disrupt RNA splicing. Variants that disrupt the donor or acceptor splice site typically lead to a loss of protein function (PMID: 16199547), and loss-of-function variants in FANCG are known to be pathogenic (PMID: 12552564).
Baylor Genetics RCV001194938 SCV004199154 pathogenic Fanconi anemia complementation group G 2023-05-20 criteria provided, single submitter clinical testing
Leiden Open Variation Database RCV001194938 SCV001364804 pathogenic Fanconi anemia complementation group G 2011-02-07 no assertion criteria provided curation Curator: Arleen D. Auerbach. Submitter to LOVD: Arleen D. Auerbach.

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