ClinVar Miner

Submissions for variant NM_004646.4(NPHS1):c.1930+12G>A

gnomAD frequency: 0.01172  dbSNP: rs528950
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Total submissions: 5
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
PreventionGenetics, part of Exact Sciences RCV000246344 SCV000310563 benign not specified criteria provided, single submitter clinical testing
Illumina Laboratory Services, Illumina RCV001125638 SCV001284731 likely benign Congenital nephrotic syndrome 2018-01-12 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score and internal cut-off values, a variant classified as likely benign is not then subjected to further curation. The score for this variant resulted in a classification of likely benign for this disease.
Labcorp Genetics (formerly Invitae), Labcorp RCV001523750 SCV001733520 benign not provided 2025-01-23 criteria provided, single submitter clinical testing
GeneDx RCV001523750 SCV002576045 likely benign not provided 2021-05-03 criteria provided, single submitter clinical testing See Variant Classification Assertion Criteria.
Natera, Inc. RCV001828143 SCV002087081 benign Finnish congenital nephrotic syndrome 2019-12-05 no assertion criteria provided clinical testing

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