ClinVar Miner

Submissions for variant NM_004656.4(BAP1):c.1922C>A (p.Ala641Asp)

dbSNP: rs1559585421
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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000686601 SCV000814126 uncertain significance BAP1-related tumor predisposition syndrome 2018-06-23 criteria provided, single submitter clinical testing This sequence change replaces alanine with aspartic acid at codon 641 of the BAP1 protein (p.Ala641Asp). The alanine residue is highly conserved and there is a moderate physicochemical difference between alanine and aspartic acid. This variant is not present in population databases (ExAC no frequency). This variant has not been reported in the literature in individuals with BAP1-related disease. Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Tolerated"; PolyPhen-2: "Probably Damaging"; Align-GVGD: "Class C0"). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.

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