Total submissions: 4
Submitter | RCV | SCV | Clinical significance | Condition | Last evaluated | Review status | Method | Comment |
---|---|---|---|---|---|---|---|---|
Illumina Laboratory Services, |
RCV001161939 | SCV001323859 | uncertain significance | Hereditary spastic paraplegia 5A | 2018-01-12 | criteria provided, single submitter | clinical testing | This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score, this variant could not be ruled out of causing disease and therefore its association with disease required further investigation. A literature search was performed for the gene, cDNA change, and amino acid change (if applicable). No publications were found based on this search. This variant was therefore classified as a variant of unknown significance for this disease. |
Invitae | RCV002071008 | SCV002454354 | likely benign | Spastic paraplegia | 2024-01-21 | criteria provided, single submitter | clinical testing | |
Ambry Genetics | RCV003163351 | SCV003868360 | uncertain significance | Inborn genetic diseases | 2023-02-02 | criteria provided, single submitter | clinical testing | The c.757A>G (p.K253E) alteration is located in exon 3 (coding exon 3) of the CYP7B1 gene. This alteration results from a A to G substitution at nucleotide position 757, causing the lysine (K) at amino acid position 253 to be replaced by a glutamic acid (E). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear. |
Athena Diagnostics | RCV003482331 | SCV004229200 | uncertain significance | not provided | 2023-06-14 | criteria provided, single submitter | clinical testing | Available data are insufficient to determine the clinical significance of the variant at this time. The frequency of this variant in the general population is higher than would generally be expected for pathogenic variants in this gene (http://gnomad.broadinstitute.org). Computational tools predict that this variant is not damaging. |