ClinVar Miner

Submissions for variant NM_004959.5(NR5A1):c.44T>C (p.Val15Ala)

dbSNP: rs2131290009
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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Diagnostics Services (NGS), CSIR - Centre For Cellular And Molecular Biology RCV002254390 SCV002525532 likely pathogenic 46,XY sex reversal 3 2022-01-18 criteria provided, single submitter clinical testing The c.44T>C variant is not present in publicly available population databases like Exome Variant Server (EVS) and Indian Exome Database, 1000 Genomes, Exome Aggregation Consortium (ExAC), Genome Aggregation Database (gnomAD), dbSNP and our in-house exome database. The variant is located in the mutational hotspot region of the gene and an alternative variant (p.Val15Met) in the same amino acid position was earlier reported as pathogenic (PMID: 17200175). In-silico pathogenicity prediction programs like MutationTaster2, CADD, Varsome etc. predicted this variant to be likely deleterious, however these predictions were not confirmed by any published functional studies.

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