ClinVar Miner

Submissions for variant NM_004990.4(MARS1):c.1967+3A>G

dbSNP: rs183042263
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001204493 SCV001375702 uncertain significance Severe early-onset pulmonary alveolar proteinosis due to MARS deficiency; Charcot-Marie-Tooth disease axonal type 2U 2019-06-17 criteria provided, single submitter clinical testing Nucleotide substitutions within the consensus splice site are a relatively common cause of aberrant splicing (PMID: 17576681, 9536098). Algorithms developed to predict the effect of sequence changes on RNA splicing suggest that this variant may disrupt the consensus splice site, but this prediction has not been confirmed by published transcriptional studies. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. This variant has not been reported in the literature in individuals with MARS-related conditions. This sequence change falls in intron 15 of the MARS gene. It does not directly change the encoded amino acid sequence of the MARS protein, but it affects a nucleotide within the consensus splice site of the intron. This variant is present in population databases (rs183042263, ExAC 0.02%).
Ambry Genetics RCV003353204 SCV004077775 uncertain significance Inborn genetic diseases 2023-07-18 criteria provided, single submitter clinical testing Unlikely to be causative of MARS1-related Charcot-Marie-Tooth disease, type 2 (AD) Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

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