ClinVar Miner

Submissions for variant NM_004991.4(MECOM):c.1834T>G (p.Phe612Val)

dbSNP: rs1309343892
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Ambry Genetics RCV004421686 SCV004903844 uncertain significance Inborn genetic diseases 2024-12-04 criteria provided, single submitter clinical testing The p.F612V variant (also known as c.1834T>G), located in coding exon 8 of the MECOM gene, results from a T to G substitution at nucleotide position 1834. The phenylalanine at codon 612 is replaced by valine, an amino acid with highly similar properties. This amino acid position is conserved. In addition, this alteration is predicted to be tolerated by in silico analysis. Based on the available evidence, the clinical significance of this variant remains unclear.
Labcorp Genetics (formerly Invitae), Labcorp RCV005065068 SCV005710657 uncertain significance not provided 2024-06-03 criteria provided, single submitter clinical testing This sequence change replaces phenylalanine, which is neutral and non-polar, with valine, which is neutral and non-polar, at codon 424 of the MECOM protein (p.Phe424Val). This variant is present in population databases (no rsID available, gnomAD 0.0009%). This variant has not been reported in the literature in individuals affected with MECOM-related conditions. An algorithm developed to predict the effect of missense changes on protein structure and function (PolyPhen-2) suggests that this variant is likely to be tolerated. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Department of Pathology and Laboratory Medicine, Sinai Health System RCV005392783 SCV006053906 likely benign Radioulnar synostosis with amegakaryocytic thrombocytopenia 2 2020-06-02 criteria provided, single submitter research

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