ClinVar Miner

Submissions for variant NM_005045.4(RELN):c.4904T>G (p.Met1635Arg)

gnomAD frequency: 0.00001  dbSNP: rs779701633
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001223729 SCV001395889 uncertain significance Norman-Roberts syndrome; Familial temporal lobe epilepsy 7 2022-10-07 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of sequence changes on RNA splicing suggest that this variant may create or strengthen a splice site. Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is not expected to disrupt RELN protein function. ClinVar contains an entry for this variant (Variation ID: 951747). This missense change has been observed in individual(s) with clinical features of RELN-related conditions (PMID: 30091983). This variant is present in population databases (no rsID available, gnomAD 0.002%). This sequence change replaces methionine, which is neutral and non-polar, with arginine, which is basic and polar, at codon 1635 of the RELN protein (p.Met1635Arg).
GeneDx RCV001776152 SCV002013658 uncertain significance not provided 2019-03-20 criteria provided, single submitter clinical testing Not observed at a significant frequency in large population cohorts (Lek et al., 2016); In silico analysis, which includes protein predictors and evolutionary conservation, supports that this variant does not alter protein structure/function; Has not been previously published as pathogenic or benign to our knowledge; This variant is associated with the following publications: (PMID: 30091983)

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