ClinVar Miner

Submissions for variant NM_005045.4(RELN):c.5005A>C (p.Ser1669Arg)

gnomAD frequency: 0.00002  dbSNP: rs1481028795
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000653005 SCV000774879 uncertain significance Norman-Roberts syndrome; Familial temporal lobe epilepsy 7 2023-10-03 criteria provided, single submitter clinical testing This sequence change replaces serine, which is neutral and polar, with arginine, which is basic and polar, at codon 1669 of the RELN protein (p.Ser1669Arg). This variant is not present in population databases (gnomAD no frequency). This variant has not been reported in the literature in individuals affected with RELN-related conditions. ClinVar contains an entry for this variant (Variation ID: 542571). Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is not expected to disrupt RELN protein function. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Ambry Genetics RCV002532003 SCV003661859 uncertain significance Inborn genetic diseases 2022-11-18 criteria provided, single submitter clinical testing The c.5005A>C (p.S1669R) alteration is located in exon 34 (coding exon 34) of the RELN gene. This alteration results from a A to C substitution at nucleotide position 5005, causing the serine (S) at amino acid position 1669 to be replaced by an arginine (R). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.
Revvity Omics, Revvity RCV003129969 SCV003813824 uncertain significance Norman-Roberts syndrome 2022-06-27 criteria provided, single submitter clinical testing

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