ClinVar Miner

Submissions for variant NM_005199.5(CHRNG):c.274C>T (p.Arg92Ter)

gnomAD frequency: 0.00001  dbSNP: rs1559302834
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories RCV000757091 SCV000885201 pathogenic not provided 2017-11-10 criteria provided, single submitter clinical testing The CHRNG c.274C>T; p.Arg92Ter variant is not published in the medical literature, in gene-specific databases, or in the ClinVar database. The variant is not listed in the dbSNP variant database nor in general population-based databases (Exome Variant Server, Genome Aggregation Database). This variant introduces a premature termination codon and is predicted to result in a truncated protein or mRNA subject to nonsense-mediated decay. Considering available information, this variant is classified as pathogenic. Pathogenic CHRNG variants are causative for autosomal recessive pterygium syndrome (MIM#253290) or Escobar syndrome (MIM#26500).
Fulgent Genetics, Fulgent Genetics RCV002493380 SCV002798950 likely pathogenic Autosomal recessive multiple pterygium syndrome; Lethal multiple pterygium syndrome 2021-09-24 criteria provided, single submitter clinical testing
Labcorp Genetics (formerly Invitae), Labcorp RCV000757091 SCV004390555 pathogenic not provided 2023-10-19 criteria provided, single submitter clinical testing This sequence change creates a premature translational stop signal (p.Arg92*) in the CHRNG gene. It is expected to result in an absent or disrupted protein product. Loss-of-function variants in CHRNG are known to be pathogenic (PMID: 16826520). This variant is not present in population databases (gnomAD no frequency). This variant has not been reported in the literature in individuals affected with CHRNG-related conditions. ClinVar contains an entry for this variant (Variation ID: 618567). For these reasons, this variant has been classified as Pathogenic.

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