ClinVar Miner

Submissions for variant NM_005249.5(FOXG1):c.1410del (p.Leu471fs)

dbSNP: rs2138662354
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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001387437 SCV001588054 pathogenic Rett syndrome, congenital variant 2020-09-03 criteria provided, single submitter clinical testing This variant has been observed in individual(s) with FOXG1-related conditions (Invitae). For these reasons, this variant has been classified as Pathogenic. This variant disrupts the C-terminus of the FOXG1 protein. Other variant(s) that disrupt this region (p.Ser472Ilefs*15) have been determined to be pathogenic (Invitae). This suggests that variants that disrupt this region of the protein are likely to be causative of disease. This variant is not present in population databases (ExAC no frequency). This sequence change results in a premature translational stop signal in the FOXG1 gene (p.Leu471Cysfs*17). While this is not anticipated to result in nonsense mediated decay, it is expected to disrupt the last 19 amino acids of the FOXG1 protein.

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