ClinVar Miner

Submissions for variant NM_005249.5(FOXG1):c.515_577del (p.Gly172_Met192del)

dbSNP: rs2138661060
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Institute of Human Genetics, University of Leipzig Medical Center RCV001785286 SCV002026235 likely pathogenic Rett syndrome, congenital variant 2018-01-20 criteria provided, single submitter clinical testing
Centre for Population Genomics, CPG RCV004558649 SCV005046885 likely pathogenic FOXG1 disorder 2024-05-30 criteria provided, single submitter curation This variant has been collected from RettBASE and curated to current modified ACMG/AMP criteria. Based on the classification scheme defined by the ClinGen Rett/Angelman-like Expert Panel for Rett/AS-like Disorders Specifications to the ACMG/AMP Variant Interpretation Guidelines VCEP 3.0, this variant is classified as likely pathogenic. At least the following criteria are met: Has been observed in at least 2 individuals with phenotypes consistent with FOXG1 disorder (PS4_Supporting). PMID: 26364767 ClinVar Variation ID: 1325749 PMID: 24836831 Protein length changes due to in-frame deletions/insertions in a non-repeat region (PM4). Co-segregation with disease in multiple affected family members in at least 2 informative meiosis (PP1). PMID: 26364767 PMID: 24836831 At least one individual with this variant has been reported with a clinical phenotype consistent with FOXG1- related condition (PP4). PMID: 26364767 PMID: 24836831 This variant is absent from gnomAD (PM2_Supporting).

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