ClinVar Miner

Submissions for variant NM_005373.3(MPL):c.1305G>C (p.Trp435Cys)

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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV002913014 SCV003249643 likely pathogenic Congenital amegakaryocytic thrombocytopenia; Essential thrombocythemia 2024-01-02 criteria provided, single submitter clinical testing This sequence change replaces tryptophan, which is neutral and slightly polar, with cysteine, which is neutral and slightly polar, at codon 435 of the MPL protein (p.Trp435Cys). This variant is present in population databases (no rsID available, gnomAD no frequency). This missense change has been observed in individuals with congenital amegakaryocytic thrombocytopenia (PMID: 16470591, 32703794). ClinVar contains an entry for this variant (Variation ID: 2043461). Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is expected to disrupt MPL protein function with a positive predictive value of 80%. In summary, the currently available evidence indicates that the variant is pathogenic, but additional data are needed to prove that conclusively. Therefore, this variant has been classified as Likely Pathogenic.
Revvity Omics, Revvity RCV003491161 SCV004238287 likely pathogenic not provided 2023-06-26 criteria provided, single submitter clinical testing

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