Total submissions: 2
Submitter | RCV | SCV | Clinical significance | Condition | Last evaluated | Review status | Method | Comment |
---|---|---|---|---|---|---|---|---|
Invitae | RCV002913014 | SCV003249643 | likely pathogenic | Congenital amegakaryocytic thrombocytopenia; Essential thrombocythemia | 2024-01-02 | criteria provided, single submitter | clinical testing | This sequence change replaces tryptophan, which is neutral and slightly polar, with cysteine, which is neutral and slightly polar, at codon 435 of the MPL protein (p.Trp435Cys). This variant is present in population databases (no rsID available, gnomAD no frequency). This missense change has been observed in individuals with congenital amegakaryocytic thrombocytopenia (PMID: 16470591, 32703794). ClinVar contains an entry for this variant (Variation ID: 2043461). Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is expected to disrupt MPL protein function with a positive predictive value of 80%. In summary, the currently available evidence indicates that the variant is pathogenic, but additional data are needed to prove that conclusively. Therefore, this variant has been classified as Likely Pathogenic. |
Revvity Omics, |
RCV003491161 | SCV004238287 | likely pathogenic | not provided | 2023-06-26 | criteria provided, single submitter | clinical testing |