ClinVar Miner

Submissions for variant NM_005458.8(GABBR2):c.2077G>T (p.Gly693Trp)

dbSNP: rs1554689320
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Centogene AG - the Rare Disease Company RCV000590835 SCV001426545 pathogenic Developmental and epileptic encephalopathy, 59 criteria provided, single submitter clinical testing
Labcorp Genetics (formerly Invitae), Labcorp RCV003591755 SCV004296036 pathogenic Epileptic encephalopathy 2024-10-23 criteria provided, single submitter clinical testing This sequence change replaces glycine, which is neutral and non-polar, with tryptophan, which is neutral and slightly polar, at codon 693 of the GABBR2 protein (p.Gly693Trp). This variant is not present in population databases (gnomAD no frequency). This missense change has been observed in individual(s) with developmental and epileptic encephalopathy (PMID: 29100083, 32860008, 35414446). In at least one individual the variant was observed to be de novo. ClinVar contains an entry for this variant (Variation ID: 496588). Invitae Evidence Modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) indicates that this missense variant is not expected to disrupt GABBR2 protein function with a negative predictive value of 80%. For these reasons, this variant has been classified as Pathogenic.
OMIM RCV000590835 SCV000700063 pathogenic Developmental and epileptic encephalopathy, 59 2020-11-11 no assertion criteria provided literature only

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