ClinVar Miner

Submissions for variant NM_005477.3(HCN4):c.3371G>A (p.Gly1124Asp)

gnomAD frequency: 0.00003  dbSNP: rs981056449
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001351225 SCV001545673 uncertain significance Brugada syndrome 8 2023-08-24 criteria provided, single submitter clinical testing This variant has not been reported in the literature in individuals affected with HCN4-related conditions. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is not expected to disrupt HCN4 protein function. ClinVar contains an entry for this variant (Variation ID: 1046643). This variant is present in population databases (no rsID available, gnomAD 0.02%). This sequence change replaces glycine, which is neutral and non-polar, with aspartic acid, which is acidic and polar, at codon 1124 of the HCN4 protein (p.Gly1124Asp).
Ambry Genetics RCV002456528 SCV002616815 uncertain significance Cardiovascular phenotype 2021-12-14 criteria provided, single submitter clinical testing The p.G1124D variant (also known as c.3371G>A), located in coding exon 8 of the HCN4 gene, results from a G to A substitution at nucleotide position 3371. The glycine at codon 1124 is replaced by aspartic acid, an amino acid with similar properties. This amino acid position is well conserved in available vertebrate species. In addition, this alteration is predicted to be tolerated by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.

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