ClinVar Miner

Submissions for variant NM_005529.7(HSPG2):c.4813G>A (p.Gly1605Arg)

gnomAD frequency: 0.00005  dbSNP: rs370427626
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Athena Diagnostics RCV001663496 SCV001880293 uncertain significance not provided 2021-03-02 criteria provided, single submitter clinical testing
Labcorp Genetics (formerly Invitae), Labcorp RCV001663496 SCV003488352 uncertain significance not provided 2022-07-26 criteria provided, single submitter clinical testing This sequence change replaces glycine, which is neutral and non-polar, with arginine, which is basic and polar, at codon 1605 of the HSPG2 protein (p.Gly1605Arg). This variant is present in population databases (rs370427626, gnomAD 0.02%). This variant has not been reported in the literature in individuals affected with HSPG2-related conditions. ClinVar contains an entry for this variant (Variation ID: 1256154). Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Deleterious"; PolyPhen-2: "Probably Damaging"; Align-GVGD: "Class C0"). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Revvity Omics, Revvity RCV001663496 SCV003809342 uncertain significance not provided 2020-02-12 criteria provided, single submitter clinical testing

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