ClinVar Miner

Submissions for variant NM_005560.6(LAMA5):c.6101A>G (p.Asp2034Gly)

gnomAD frequency: 0.00002  dbSNP: rs773956500
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Total submissions: 4
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001855848 SCV002185423 uncertain significance not provided 2024-11-05 criteria provided, single submitter clinical testing This sequence change replaces aspartic acid, which is acidic and polar, with glycine, which is neutral and non-polar, at codon 2034 of the LAMA5 protein (p.Asp2034Gly). This variant is present in population databases (rs773956500, gnomAD 0.009%). This missense change has been observed in individual(s) with nephrotic syndrome (internal data). ClinVar contains an entry for this variant (Variation ID: 599489). An algorithm developed to predict the effect of missense changes on protein structure and function (PolyPhen-2) suggests that this variant is likely to be tolerated. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Ambry Genetics RCV002533761 SCV003747068 uncertain significance Inborn genetic diseases 2021-08-30 criteria provided, single submitter clinical testing The c.6101A>G (p.D2034G) alteration is located in exon 46 (coding exon 46) of the LAMA5 gene. This alteration results from a A to G substitution at nucleotide position 6101, causing the aspartic acid (D) at amino acid position 2034 to be replaced by a glycine (G). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.
Genomic Medicine Center of Excellence, King Faisal Specialist Hospital and Research Centre RCV003989118 SCV004805736 uncertain significance Nephrotic syndrome, IIa 26 2024-03-29 criteria provided, single submitter clinical testing
Institute of Human Genetics, FAU Erlangen, Friedrich-Alexander-Universität Erlangen-Nürnberg RCV000736126 SCV000864423 likely pathogenic Short stature 2001-11-18 no assertion criteria provided case-control

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