ClinVar Miner

Submissions for variant NM_005585.5(SMAD6):c.983C>T (p.Pro328Leu)

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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV003534189 SCV004273876 uncertain significance Aortic valve disease 2 2023-07-10 criteria provided, single submitter clinical testing This sequence change replaces proline, which is neutral and non-polar, with leucine, which is neutral and non-polar, at codon 328 of the SMAD6 protein (p.Pro328Leu). The frequency data for this variant in the population databases is considered unreliable, as metrics indicate poor data quality at this position in the gnomAD database. This variant has not been reported in the literature in individuals affected with SMAD6-related conditions. Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is not expected to disrupt SMAD6 protein function. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Ambry Genetics RCV004369117 SCV005023007 uncertain significance Inborn genetic diseases 2024-02-05 criteria provided, single submitter clinical testing The p.P328L variant (also known as c.983C>T), located in coding exon 4 of the SMAD6 gene, results from a C to T substitution at nucleotide position 983. The proline at codon 328 is replaced by leucine, an amino acid with similar properties. This amino acid position is conserved. In addition, the in silico prediction for this alteration is inconclusive. Based on the available evidence, the clinical significance of this alteration remains unclear.

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